/**
 * \file
 *
 * \brief Arduino Due/X board init.
 *
 * Copyright (c) 2011 - 2012 Atmel Corporation. All rights reserved.
 *
 * \asf_license_start
 *
 * \page License
 *
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions are met:
 *
 * 1. Redistributions of source code must retain the above copyright notice,
 *    this list of conditions and the following disclaimer.
 *
 * 2. Redistributions in binary form must reproduce the above copyright notice,
 *    this list of conditions and the following disclaimer in the documentation
 *    and/or other materials provided with the distribution.
 *
 * 3. The name of Atmel may not be used to endorse or promote products derived
 *    from this software without specific prior written permission.
 *
 * 4. This software may only be redistributed and used in connection with an
 *    Atmel microcontroller product.
 *
 * THIS SOFTWARE IS PROVIDED BY ATMEL "AS IS" AND ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
 * MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT ARE
 * EXPRESSLY AND SPECIFICALLY DISCLAIMED. IN NO EVENT SHALL ATMEL BE LIABLE FOR
 * ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 * DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 * OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 * HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT,
 * STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN
 * ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
 * POSSIBILITY OF SUCH DAMAGE.
 *
 * \asf_license_stop
 *
 */

#include "compiler.h"
#include "board.h"
#include "conf_board.h"
#include "gpio.h"

void board_init(void)
{
#ifndef CONF_BOARD_KEEP_WATCHDOG_AT_INIT
	/* Disable the watchdog */
	WDT->WDT_MR = WDT_MR_WDDIS;
#endif

	/* Configure LED pins */
	gpio_configure_pin(LED0_GPIO, LED0_FLAGS);
	gpio_configure_pin(LED1_GPIO, LED1_FLAGS);
	gpio_configure_pin(LED2_GPIO, LED2_FLAGS);

	/* Configure Push Button pins */
	gpio_configure_pin(GPIO_PUSH_BUTTON_1, GPIO_PUSH_BUTTON_1_FLAGS);
	gpio_configure_pin(GPIO_PUSH_BUTTON_2, GPIO_PUSH_BUTTON_2_FLAGS);

#ifdef CONF_BOARD_UART_CONSOLE
	/* Configure UART pins */
	gpio_configure_group(PINS_UART_PIO, PINS_UART, PINS_UART_FLAGS);
#endif

	/* Configure ADC example pins */
#ifdef CONF_BOARD_ADC
	/* TC TIOA configuration */
	gpio_configure_pin(PIN_TC0_TIOA0,PIN_TC0_TIOA0_FLAGS);

	/* ADC Trigger configuration */
	gpio_configure_pin(PINS_ADC_TRIG, PINS_ADC_TRIG_FLAG);

	/* PWMH0 configuration */
	gpio_configure_pin(PIN_PWMC_PWMH0_TRIG, PIN_PWMC_PWMH0_TRIG_FLAG);
#endif

#ifdef CONF_BOARD_PWM_LED0
	/* Configure PWM LED0 pin */
	gpio_configure_pin(PIN_PWM_LED0_GPIO, PIN_PWM_LED0_FLAGS);
#endif

#ifdef CONF_BOARD_PWM_LED1
	/* Configure PWM LED1 pin */
	gpio_configure_pin(PIN_PWM_LED1_GPIO, PIN_PWM_LED1_FLAGS);
#endif

#ifdef CONF_BOARD_PWM_LED2
	/* Configure PWM LED2 pin */
	gpio_configure_pin(PIN_PWM_LED2_GPIO, PIN_PWM_LED2_FLAGS);
#endif

	/* Configure SPI0 pins */
#ifdef CONF_BOARD_SPI0
	gpio_configure_pin(SPI0_MISO_GPIO, SPI0_MISO_FLAGS);
	gpio_configure_pin(SPI0_MOSI_GPIO, SPI0_MOSI_FLAGS);
	gpio_configure_pin(SPI0_SPCK_GPIO, SPI0_SPCK_FLAGS);

	/**
	 * For NPCS 1, 2, and 3, different PINs can be used to access the same
	 * NPCS line.
	 * Depending on the application requirements, the default PIN may not be
	 * available.
	 * Hence a different PIN should be selected using the
	 * CONF_BOARD_SPI_NPCS_GPIO and
	 * CONF_BOARD_SPI_NPCS_FLAGS macros.
	 */

#   ifdef CONF_BOARD_SPI0_NPCS0
		gpio_configure_pin(SPI0_NPCS0_GPIO, SPI0_NPCS0_FLAGS);
#   endif

#   ifdef CONF_BOARD_SPI0_NPCS1
	        gpio_configure_pin(SPI0_NPCS1_PA29_GPIO,SPI0_NPCS1_PA29_FLAGS);
#   endif
#endif // #ifdef CONF_BOARD_SPI0

	/* Configure SPI1 pins */
#ifdef CONF_BOARD_SPI1
	gpio_configure_pin(SPI1_MISO_GPIO, SPI1_MISO_FLAGS);
	gpio_configure_pin(SPI1_MOSI_GPIO, SPI1_MOSI_FLAGS);
	gpio_configure_pin(SPI1_SPCK_GPIO, SPI1_SPCK_FLAGS);

#   ifdef CONF_BOARD_SPI1_NPCS0
		gpio_configure_pin(SPI1_NPCS0_GPIO, SPI1_NPCS0_FLAGS);
#   endif

#   ifdef CONF_BOARD_SPI1_NPCS1
		gpio_configure_pin(SPI1_NPCS1_GPIO, SPI1_NPCS1_FLAGS);
#   endif

#   ifdef CONF_BOARD_SPI1_NPCS2
		gpio_configure_pin(SPI1_NPCS2_GPIO, SPI1_NPCS2_FLAGS);
#   endif

#   ifdef CONF_BOARD_SPI1_NPCS3
		gpio_configure_pin(SPI1_NPCS3_GPIO, SPI1_NPCS3_FLAGS);
#   endif
#endif

#ifdef CONF_BOARD_TWI0
	gpio_configure_pin(TWI0_DATA_GPIO, TWI0_DATA_FLAGS);
	gpio_configure_pin(TWI0_CLK_GPIO, TWI0_CLK_FLAGS);
#endif

#ifdef CONF_BOARD_TWI1
	gpio_configure_pin(TWI1_DATA_GPIO, TWI1_DATA_FLAGS);
	gpio_configure_pin(TWI1_CLK_GPIO, TWI1_CLK_FLAGS);
#endif

#ifdef CONF_BOARD_USART_RXD
	/* Configure USART RXD pin */
	gpio_configure_pin(PIN_USART0_RXD_IDX, PIN_USART0_RXD_FLAGS);
#endif

#ifdef CONF_BOARD_USART_TXD
	/* Configure USART TXD pin */
	gpio_configure_pin(PIN_USART0_TXD_IDX, PIN_USART0_TXD_FLAGS);
#endif

#ifdef CONF_BOARD_USB_PORT
	/* Configure USB_ID (UOTGID) pin */
	gpio_configure_pin(USB_ID_GPIO, USB_ID_FLAGS);
	/* Configure USB_VBOF (UOTGVBOF) pin */
	gpio_configure_pin(USB_VBOF_GPIO, USB_VBOF_FLAGS);
#endif

#ifdef CONF_BOARD_CAN0
	/* Configure the CAN0 TX and RX pins. */
	gpio_configure_pin(PIN_CAN0_RX_IDX, PIN_CAN0_RX_FLAGS);
	gpio_configure_pin(PIN_CAN0_TX_IDX, PIN_CAN0_TX_FLAGS);
	/* Configure the transiver0 RS & EN pins. */
	gpio_configure_pin(PIN_CAN0_TR_RS_IDX, PIN_CAN0_TR_RS_FLAGS);
	gpio_configure_pin(PIN_CAN0_TR_EN_IDX, PIN_CAN0_TR_EN_FLAGS);
#endif

#ifdef CONF_BOARD_CAN1
	/* Configure the CAN1 TX and RX pin. */
	gpio_configure_pin(PIN_CAN1_RX_IDX, PIN_CAN1_RX_FLAGS);
	gpio_configure_pin(PIN_CAN1_TX_IDX, PIN_CAN1_TX_FLAGS);
	/* Configure the transiver1 RS & EN pins. */
	//gpio_configure_pin(PIN_CAN1_TR_RS_IDX, PIN_CAN1_TR_RS_FLAGS);
	//gpio_configure_pin(PIN_CAN1_TR_EN_IDX, PIN_CAN1_TR_EN_FLAGS);
#endif


#ifdef CONF_BOARD_MMA7341L
	/* Configure MMA7341L mode set control pin */
	gpio_configure_pin(PIN_MMA7341L_MODE, PIN_MMA7341L_MODE_FLAG);
	/* Configure MMA7341L x,y,z axis output voltage pin */
	gpio_configure_pin(PIN_MMA7341L_X_AXIS, PIN_MMA7341L_X_AXIS_FLAG);
	gpio_configure_pin(PIN_MMA7341L_Y_AXIS, PIN_MMA7341L_Y_AXIS_FLAG);
	gpio_configure_pin(PIN_MMA7341L_Z_AXIS, PIN_MMA7341L_Z_AXIS_FLAG);
#endif

#ifdef CONF_BOARD_ADS7843
	/* Configure Touchscreen SPI pins */
	gpio_configure_pin(BOARD_ADS7843_IRQ_GPIO,BOARD_ADS7843_IRQ_FLAGS);
	gpio_configure_pin(BOARD_ADS7843_BUSY_GPIO, BOARD_ADS7843_BUSY_FLAGS);
	gpio_configure_pin(SPI0_MISO_GPIO, SPI0_MISO_FLAGS);
	gpio_configure_pin(SPI0_MOSI_GPIO, SPI0_MOSI_FLAGS);
	gpio_configure_pin(SPI0_SPCK_GPIO, SPI0_SPCK_FLAGS);
	gpio_configure_pin(SPI0_NPCS0_GPIO, SPI0_NPCS0_FLAGS);
#endif
}